close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0403Acyl dehydratase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
SPRI_0402
Dehydratase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.997
SPRI_3216
Dehydratase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.987
SPRI_0401
3-oxoacyl-ACP reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  0.920
SPRI_0404
Lipid-transfer protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.915
SPRI_4264
acetyl-CoA acetyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.651
SPRI_0405
acyl-CoA dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  0.612
SPRI_0399
acyl-CoA dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  0.580
SPRI_0398
Short-chain dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  0.575
SPRI_0397
acyl-CoA dehydrogenase domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.547
SPRI_4262
Nucleic acid-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.536
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.