Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_0437Carbonic anhydrase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
SPRI_1323
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 
0.927
SPRI_3528
Integral membrane transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
0.925
SPRI_5411
Carbonic anhydrase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 0.923
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.729
SPRI_1322
Transmembrane sulfate transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.720
SPRI_5657
Non-ribosomal peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.591
SPRI_0522
Transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.585
SPRI_6244
Anhydrase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.585
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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