Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0526GDSL family lipase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (448 aa)    
Predicted Functional Partners:
SPRI_6648
Glycosyl hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.769
SPRI_0427
1,4-beta-xylanase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
   0.727
SPRI_1677
1,4-beta-xylanase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
   0.689
SPRI_0426
alpha-L-arabinofuranosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.662
SPRI_6649
1,4-beta-xylanase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
   0.655
SPRI_0877
Pectate lyase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.646
SPRI_3659
Esterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.629
SPRI_0813
Pectate lyase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.600
SPRI_6625
Glycosyl hydrolase family 5; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
 
 0.582
SPRI_2327
Sugar hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
   0.565
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.