STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0564Aldose epimerase; Converts alpha-aldose to the beta-anomer. (356 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.975
SPRI_1824
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.937
SPRI_6573
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.930
SPRI_6582
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.906
SPRI_0975
Alpha-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
  0.905
SPRI_2811
Polyphosphate glucokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 0.905
SPRI_0366
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.901
SPRI_3598
Aldose epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
  0.900
SPRI_4718
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.685
SPRI_5507
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.685
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.