Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPRI_0589Alpha-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (535 aa)    
Predicted Functional Partners:
SPRI_2444
Maltokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 0.991
SPRI_0975
Alpha-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.938
SPRI_2443
Trehalose synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
0.933
SPRI_4864
4-alpha-glucanotransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.931
SPRI_1863
Glycosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
  0.924
SPRI_0517
Sugar kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.922
SPRI_6507
Fructokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.921
SPRI_0791
Fructokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.920
SPRI_1089
6-phospho-beta-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.910
SPRI_4855
6-phospho-beta-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.910
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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