STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0597Metallophosphoesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (1306 aa)    
Predicted Functional Partners:
SPRI_0598
ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.887
SPRI_0599
Caspase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.872
SPRI_1269
ATPase AAA; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.734
SPRI_5193
ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.678
SPRI_1851
SARP family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.627
SPRI_1270
Serine protease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.605
SPRI_0600
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.561
SPRI_0828
Branched-chain amino acid ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.511
SPRI_3489
Polyketide synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.483
SPRI_3488
Thioesterase domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.444
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.