Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPRI_0735Hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (487 aa)    
Predicted Functional Partners:
SPRI_0739
Sugar transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.861
SPRI_0883
Cellulose 1,4-beta-cellobiosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 0.820
SPRI_0738
Sugar transporter membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.808
SPRI_0736
Beta-hexosaminidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.793
SPRI_0737
Sugar ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.786
SPRI_1726
Peptidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.728
SPRI_0734
Sugar transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.682
SPRI_1727
ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.670
SPRI_0824
Beta-mannosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.633
SPRI_1817
Cellulose binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.631
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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