STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0736Beta-hexosaminidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (518 aa)    
Predicted Functional Partners:
SPRI_3026
beta-N-acetylglucosaminidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 
0.929
SPRI_4756
beta-N-acetylhexosaminidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 
0.918
SPRI_4599
beta-N-acetylhexosaminidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 
0.908
SPRI_2640
Sugar hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 0.906
SPRI_4791
beta-N-acetylhexosaminidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.
    
 0.906
SPRI_0735
Hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.801
SPRI_2782
Chitinase II; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.799
SPRI_0737
Sugar ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.777
SPRI_0738
Sugar transporter membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.774
SPRI_0739
Sugar transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.772
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.