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Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0749Oxygenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
SPRI_0748
Nucleotidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.779
rpmF
50S ribosomal protein L32; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.
       0.550
SPRI_0186
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.513
SPRI_7167
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.513
SPRI_2274
Luciferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.486
SPRI_5762
Nucleotidyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.477
SPRI_5272
Kanamycin biosynthetic protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.452
SPRI_1423
Two-component system response regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
   0.440
SPRI_2856
Secretory protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
      
 0.420
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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