Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_0751Secreted beta-lactamase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (299 aa)    
Predicted Functional Partners:
SPRI_1506
Class A beta-lactamase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
  0.912
SPRI_5167
Class A beta-lactamase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
  0.912
SPRI_1017
Peptidase C45; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
  0.900
SPRI_4358
Penicillin amidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
  0.900
SPRI_6973
Penicillin amidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
  0.900
SPRI_0750
Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
     
 0.784
SPRI_0752
MBL fold metallo-hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.771
SPRI_6966
Amidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.481
SPRI_4743
MerR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.458
SPRI_5383
N-acetylmuramoyl-L-alanine amidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.432
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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