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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0791Fructokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (301 aa)    
Predicted Functional Partners:
SPRI_6864
PTS lactose transporter subunit IIC; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.941
SPRI_6506
Levanase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.923
SPRI_1757
Alpha-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.922
SPRI_1865
Alpha-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.922
SPRI_0517
Sugar kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 
0.920
SPRI_0589
Alpha-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.920
xylA
Xylose isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family.
 
  
 0.919
SPRI_6507
Fructokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
  
  
 
0.918
pgi
Glucose-6-phosphate isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the GPI family.
  
 
 0.915
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
  
 
 0.912
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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