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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0909DUF2961 domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (363 aa)    
Predicted Functional Partners:
SPRI_0908
Sugar ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.741
SPRI_0910
Xylulose kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.
 
     0.662
SPRI_6486
Alpha-L-rhamnosidase N-terminal domain protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.567
SPRI_0906
Sugar ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.555
SPRI_0911
Fucose isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.547
SPRI_0574
Transcriptional initiation protein Tat; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.546
SPRI_6485
DNA-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.540
SPRI_0907
Sugar ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.515
SPRI_1977
Glycosyl hydrolase, family 2; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.465
SPRI_0573
Hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.435
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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