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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0923Serine/threonine protein phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (81 aa)    
Predicted Functional Partners:
SPRI_0922
Serine/threonine protein phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     0.799
SPRI_4462
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.684
SPRI_1618
Regulatory protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.679
SPRI_3514
Anti-sigma regulatory factor; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.679
SPRI_4305
Regulatory protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.629
SPRI_2717
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.622
SPRI_6293
Regulatory protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.621
SPRI_2409
AbaA-like regulatory protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.620
SPRI_3443
Regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.615
SPRI_6871
Histidine kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.614
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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