STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0925Transposase IS4 family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (84 aa)    
Predicted Functional Partners:
SPRI_0926
Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.705
SPRI_4202
Dimethylmenaquinone methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.636
SPRI_5651
Aspartate aminotransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.572
SPRI_1837
salicylyl-CoA 5-hydroxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.498
SPRI_1479
Transmembrane transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.479
SPRI_2466
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.479
SPRI_4625
FAD-linked oxidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.440
SPRI_1442
Malate synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the malate synthase family.
  
  
 0.426
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.418
SPRI_0167
FAD linked oxidase domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.415
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.