STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0976Protein-tyrosine phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
SPRI_3833
Protein-tyrosine phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.938
SPRI_5281
Protein-tyrosine phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 
0.922
SPRI_2527
Protein-tyrosine phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.908
SPRI_3231
NADH-quinone oxidoreductase subunit M; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.852
SPRI_3263
NADH:ubiquinone oxidoreductase subunit M; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.852
SPRI_0973
SGNH hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.841
SPRI_3733
Phenylacetic acid degradation NADH oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.811
SPRI_6551
Ferredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.811
SPRI_0975
Alpha-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.761
SPRI_3528
Integral membrane transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
   0.695
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.