Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_0976Protein-tyrosine phosphatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
SPRI_0973
SGNH hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.763
SPRI_0975
Alpha-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.746
SPRI_3231
NADH-quinone oxidoreductase subunit M; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.720
SPRI_3263
NADH:ubiquinone oxidoreductase subunit M; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 
 0.720
SPRI_3528
Integral membrane transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.637
SPRI_1322
Transmembrane sulfate transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.624
SPRI_6603
Sulfate permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.624
SPRI_1882
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.586
SPRI_1887
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.586
SPRI_0963
Metallo-beta-lactamase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.581
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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