Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_0993Transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (577 aa)    
Predicted Functional Partners:
SPRI_0990
Transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.942
SPRI_0992
Nucleotide sugar-1-phosphate transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.915
SPRI_0991
Dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.904
SPRI_0989
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.894
SPRI_2713
NYN domain containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.752
SPRI_5443
NYN domain containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.744
SPRI_2152
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.708
SPRI_0994
UDP-glucose 4-epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.693
SPRI_4225
Transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.686
SPRI_5688
Flagellar M-ring protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.650
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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