STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_11243-oxoadipate:succinyl-CoA transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
SPRI_1125
3-oxoadipate:succinyl-CoA transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 0.999
SPRI_5498
CoA-transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 0.997
SPRI_6641
CchlO; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.941
SPRI_1365
Amidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
     
  0.900
SPRI_1450
Amidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
     
  0.900
SPRI_1123
3-hydroxyacyl-CoA dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.648
SPRI_1384
3-oxoadipate enol-lactonase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.636
SPRI_1128
acetyl-CoA acetyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.539
SPRI_2599
Alpha-ketoglutarate decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
  
 0.515
SPRI_5491
acetyl-CoA acetyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.501
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.