STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_1275Oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (276 aa)    
Predicted Functional Partners:
SPRI_0180
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.738
SPRI_5899
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.738
SPRI_7173
Methionine synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 0.738
SPRI_2800
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
  
 0.678
SPRI_4104
Trehalose phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
  
 0.678
SPRI_5091
Aldo/keto reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.658
SPRI_1274
Tat pathway signal sequence domain protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.652
SPRI_2978
Oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.637
SPRI_0663
Aldo/keto reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.630
SPRI_1267
Transmembrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.612
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.