Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_1368Nitrate reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (513 aa)    
Predicted Functional Partners:
SPRI_1370
Phenylhydantoinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.959
SPRI_1369
F420-dependent oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.893
SPRI_1372
Apolipoprotein acyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.882
SPRI_1371
Aminotransferase class III; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.785
SPRI_1431
Allantoicase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.712
SPRI_1373
UL36 very large tegument protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.567
SPRI_1553
Hydroxyisourate hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.525
SPRI_1549
Uracil permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.520
SPRI_1551
Uracil permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.506
SPRI_1552
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.459
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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