Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
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[Homology]
Score
SPRI_1406Riboflavin biosynthesis protein RibD; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (206 aa)    
Predicted Functional Partners:
SPRI_1735
Deaminase/reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.607
SPRI_1428
Bifunctional deaminase-reductase domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.596
SPRI_2914
Riboflavin biosynthesis protein RibD; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.585
SPRI_0623
Deaminase/reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.571
SPRI_1721
Glyoxalase/bleomycin resistance protein/dioxygenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.557
SPRI_6209
Deaminase/reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.538
clpX
ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
   
 
 0.505
SPRI_0850
Deaminase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.454
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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