STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_1413Glucokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the GPI family.
  
 
 0.936
SPRI_6170
PTS glucose transporter subunit IIA; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.911
SPRI_3803
Inositol-3-phosphate synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.908
SPRI_1245
Myo-inositol-1-phosphate synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.906
SPRI_1089
6-phospho-beta-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.905
SPRI_4855
6-phospho-beta-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.905
SPRI_1824
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 0.902
SPRI_6573
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
 0.902
SPRI_1412
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.884
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.842
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.