Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_1645Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
SPRI_1484
Sulfatase modifying factor 1; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   0.628
SPRI_5388
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.587
egtB
Sulfatase-modifying factor 1; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family.
  
   0.580
SPRI_0901
Cytoplasmic protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.580
SPRI_4814
Copper-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 
 0.566
SPRI_1644
Potassium transporter TrkA; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.535
SPRI_4131
Copper homeostasis protein CutC; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the CutC family.
     
 0.528
SPRI_4130
Carbonate dehydratase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 0.506
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 
 0.481
SPRI_4813
Carbonate dehydratase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 0.475
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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