Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_17081,4-beta-xylanase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
SPRI_1709
Coagulation factor 5/8 type domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    
0.812
SPRI_2439
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.776
SPRI_1710
Chitinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    
0.663
SPRI_3347
Putative secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.659
SPRI_4662
CHRD domain protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.631
SPRI_4832
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.593
SPRI_1777
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.574
SPRI_1862
Sulfonate ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
    0.539
SPRI_4054
Pectate_lyase_3 domain containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.532
SPRI_2794
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.493
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.