Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
SPRI_1732Triacylglycerol lipase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (450 aa)    
Predicted Functional Partners:
SPRI_5817
Lipase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.530
SPRI_1733
GTP cyclohydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.506
SPRI_6688
ABC transporter ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.469
SPRI_0149
Thioesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.441
SPRI_6170
PTS glucose transporter subunit IIA; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
    
   0.441
SPRI_7204
Thioesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.441
cpp30
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.429
SPRI_3060
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.429
SPRI_7101
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.429
SPRI_0454
Polyketide cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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