Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_1733GTP cyclohydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (381 aa)    
Predicted Functional Partners:
SPRI_0582
PE-PGRS family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.661
SPRI_6127
Putative CbxX/CfqX family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 
 0.653
SPRI_6453
Sporulation protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 
 0.649
SPRI_3694
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.645
SPRI_5816
ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.631
SPRI_6723
ATPase AAA; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.603
SPRI_2698
Molybdopterin biosynthesis protein MoeZ; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.547
SPRI_5926
SnoaL-like polyketide cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.547
SPRI_2681
UBA/THIF-type NAD/FAD-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 0.534
SPRI_1732
Triacylglycerol lipase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.506
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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