Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_1887Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
SPRI_1888
Haloacid dehalogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 0.993
SPRI_1889
Transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.975
SPRI_1886
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.972
SPRI_1885
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.971
SPRI_1890
Carbamoyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.965
SPRI_1883
D-beta-D-heptose 1-phosphate adenosyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
   
 0.949
SPRI_1884
Phosphoheptose isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.948
SPRI_1891
Epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.862
SPRI_1882
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    
0.779
SPRI_6310
Cation transport regulator ChaB; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.688
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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