Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_1926Dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (510 aa)    
Predicted Functional Partners:
SPRI_1919
Bacteriocin biosynthesis protein SagD; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.742
SPRI_0918
Bacteriocin biosynthesis protein SagD; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.692
SPRI_1602
Fatty acid-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.593
SPRI_6653
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.523
SPRI_6655
NHLP family bacteriocin export ABC transporter permease/ATPase subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.491
SPRI_0186
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.476
SPRI_7167
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.476
SPRI_6654
NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.470
SPRI_6186
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.458
SPRI_4171
Cysteine transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.455
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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