Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SPRI_1974Para-nitrobenzyl esterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. (552 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
  0.659
SPRI_1973
NIPSNAP family containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.466
SPRI_1972
Helix-turn-helix type 11 domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.424
SPRI_0872
Glycoside hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
     0.423
SPRI_3253
Leupeptin-inactivating enzyme 1; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.422
SPRI_3917
Amidohydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.422
SPRI_1299
Serine/arginine repetitive matrix protein 1; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.408
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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