STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_2011Glucose-1-phosphate cytidylyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (269 aa)    
Predicted Functional Partners:
SPRI_2013
NAD dependent epimerase/dehydratase family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.981
SPRI_2012
N-acetylglucosaminylphosphatidylinositol deacetylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.973
SPRI_2014
Peptidase M28; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.966
SPRI_2019
Glutamate-1-semialdehyde 2,1-aminomutase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.962
SPRI_2016
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.959
SPRI_2010
SAM-dependent methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.954
SPRI_2441
Alpha-glucan phosphorylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.929
SPRI_2018
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.924
SPRI_2005
Oxidoreductase, NAD-binding domain protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.923
SPRI_2017
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.920
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.