Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
SPRI_2013NAD dependent epimerase/dehydratase family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (341 aa)    
Predicted Functional Partners:
SPRI_2010
SAM-dependent methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 0.988
SPRI_2011
Glucose-1-phosphate cytidylyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.979
SPRI_2012
N-acetylglucosaminylphosphatidylinositol deacetylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.970
SPRI_2014
Peptidase M28; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.968
SPRI_2016
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.963
SPRI_2019
Glutamate-1-semialdehyde 2,1-aminomutase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.959
SPRI_2017
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.932
SPRI_2015
Putative integral membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.931
SPRI_2005
Oxidoreductase, NAD-binding domain protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.925
SPRI_2009
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.915
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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