rpmF-2 protein (Streptomyces pristinaespiralis)

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rpmF-2

50S ribosomal protein L32; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)

Predicted Functional Partners:

rpmB

0.991

rpmJ

0.989

SPRI_2285

0.986

rpsZ

0.986

rnc

0.985

rpmG

0.983

rpmB-2

0.983

rpsO

0.982

rpsP

0.982

rplQ

0.982

Your Current Organism:

Streptomyces pristinaespiralis

NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRI_2285	rnc	SPRI_2285	SPRI_2283	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.944
SPRI_2285	rplQ	SPRI_2285	SPRI_3163	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.786
SPRI_2285	rpmB	SPRI_2285	SPRI_2293	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	50S ribosomal protein L28; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.	0.953
SPRI_2285	rpmB-2	SPRI_2285	SPRI_3449	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	50S ribosomal protein L28; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.	0.759
SPRI_2285	rpmF-2	SPRI_2285	SPRI_2284	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	50S ribosomal protein L32; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.	0.986
SPRI_2285	rpmG	SPRI_2285	SPRI_3218	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	50S ribosomal protein L33 2; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.	0.773
SPRI_2285	rpmJ	SPRI_2285	SPRI_3167	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	50S ribosomal protein L36; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.	0.710
SPRI_2285	rpsO	SPRI_2285	SPRI_2166	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.770
SPRI_2285	rpsP	SPRI_2285	SPRI_2262	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	30S ribosomal protein S16; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.	0.853
SPRI_2285	rpsZ	SPRI_2285	SPRI_3178	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.735
rnc	SPRI_2285	SPRI_2283	SPRI_2285	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Metal-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.944
rnc	rplQ	SPRI_2283	SPRI_3163	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S ribosomal protein L17; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.933
rnc	rpmB	SPRI_2283	SPRI_2293	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S ribosomal protein L28; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.	0.926
rnc	rpmB-2	SPRI_2283	SPRI_3449	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S ribosomal protein L28; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.	0.854
rnc	rpmF-2	SPRI_2283	SPRI_2284	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S ribosomal protein L32; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.	0.985
rnc	rpmG	SPRI_2283	SPRI_3218	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S ribosomal protein L33 2; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.	0.887
rnc	rpmJ	SPRI_2283	SPRI_3167	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S ribosomal protein L36; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.	0.908
rnc	rpsO	SPRI_2283	SPRI_2166	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.980
rnc	rpsP	SPRI_2283	SPRI_2262	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	30S ribosomal protein S16; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.	0.933
rnc	rpsZ	SPRI_2283	SPRI_3178	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.869

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