Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_2368GCN5 family acetyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
SPRI_2369
GCN5 family acetyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.653
SPRI_4630
Protease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.614
SPRI_0683
TIGR03083 family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.589
SPRI_1149
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.559
SPRI_4310
MerR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.530
SPRI_2370
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.523
SPRI_6678
Alpha-mannosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.500
SPRI_2645
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.435
SPRI_0146
Pyridoxal-dependent decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.415
SPRI_7207
Pyridoxal-dependent decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.415
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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