Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_2607MBL fold metallo-hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (288 aa)    
Predicted Functional Partners:
SPRI_1871
Carbohydrate kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.561
SPRI_2606
LigA protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.540
vapC
Toxin PIN; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
    0.512
SPRI_3195
LmbE family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.474
SPRI_2604
Peptidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.470
SPRI_5089
Acetyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.459
SPRI_4331
LigA protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.454
SPRI_2605
DNA-directed RNA polymerase sigma-70 factor; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.444
SPRI_1724
Mucin-7; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.436
SPRI_4648
HNH endonuclease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.423
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.