Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SPRI_2619Superoxide dismutase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
SPRI_2618
Signal peptidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.952
katG
Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.563
katG-2
Catalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.563
SPRI_0356
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
     
 0.539
SPRI_1573
Catalase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the catalase family.
     
 0.539
SPRI_2666
Catalase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the catalase family.
     
 0.539
SPRI_0125
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.447
SPRI_7228
Superoxide dismutase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
      
 0.447
cpp8
Acyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.416
SPRI_7079
Acyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.416
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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