STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_2694methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (186 aa)    
Predicted Functional Partners:
SPRI_2693
Helicase UvrD; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
 
     0.824
SPRI_2695
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.783
SPRI_2691
ATP-dependent DNA helicase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
 
     0.720
SPRI_2690
Peptidase M20; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.642
SPRI_2689
NUDIX hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.633
SPRI_5949
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.583
SPRI_4616
Type III restriction enzyme, res subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   
 0.510
SPRI_1592
MerR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.489
SPRI_1591
ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.461
SPRI_2297
Lipoprotein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.454
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.