STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_2709Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
SPRI_3730
phenylacetate-CoA oxygenase subunit PaaB; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.820
SPRI_2710
ATP-dependent RNA helicase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.
       0.699
SPRI_2712
Hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.681
SPRI_4019
SseC; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.590
SPRI_3733
Phenylacetic acid degradation NADH oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.493
SPRI_6551
Ferredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.493
SPRI_4151
Integral membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.471
SPRI_4365
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.462
SPRI_4053
Protein of unknown function DUF2596; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.456
SPRI_3542
ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.451
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.