Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_2750Putative membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (728 aa)    
Predicted Functional Partners:
SPRI_2751
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.715
mshB
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
       0.715
SPRI_2753
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.700
SPRI_2754
Peptidase S9; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.649
SPRI_3799
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.572
SPRI_4425
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.566
SPRI_2497
Large Ala/Glu-rich protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.551
SPRI_3874
Preprotein translocase SecA; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.551
lpqB
Lipoprotein LpqB; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.534
SPRI_5200
MerR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.530
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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