STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_2865Carboxypeptidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
SPRI_2864
Iron transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.553
SPRI_4737
Histidine kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.488
SPRI_6331
Protease inhibitor SIL-V5; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the protease inhibitor I16 (SSI) family.
  
 
   0.458
SPRI_3012
Toxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.456
SPRI_5506
Trypsin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.432
SPRI_4876
Serine protease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
   
 0.431
SPRI_1525
Histidine kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.422
SPRI_2866
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.422
SPRI_6962
Toxin-antitoxin system toxin component; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.418
SPRI_0497
PRC domain containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.