STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_2885Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family. (429 aa)    
Predicted Functional Partners:
SPRI_2883
Dimethylaniline monooxygenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.873
SPRI_2884
Carboxylate--amine ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.858
SPRI_2891
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.780
SPRI_2887
LPS biosynthesis protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.774
SPRI_4732
Tetratricopeptide repeat protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.714
SPRI_3859
Phage protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.685
SPRI_2886
Glycosyl transferase family 1; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.666
SPRI_6153
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.635
SPRI_2890
Virulence factor MVIN family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.619
SPRI_2888
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.587
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.