Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_2938DUF1330 domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (117 aa)    
Predicted Functional Partners:
SPRI_2891
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.565
SPRI_5929
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.551
SPRI_2939
Acetyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.527
egtD
Methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.506
SPRI_2884
Carboxylate--amine ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.465
SPRI_2883
Dimethylaniline monooxygenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.458
SPRI_2937
DNA-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.454
SPRI_0529
Kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.424
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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