Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_3280Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
SPRI_1359
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.662
SPRI_1223
Integral membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.585
SPRI_1352
DNA polymerase subunit beta; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.576
SPRI_1950
Putative MarR-family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.562
SPRI_1505
Cytoplasmic protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.555
SPRI_3281
Hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.534
SPRI_1204
Microbial collagenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.522
SPRI_0783
Protein of unknown function DUF1990; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.502
SPRI_0683
TIGR03083 family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.478
SPRI_0917
Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.470
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.