Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_3490Amine oxidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (427 aa)    
Predicted Functional Partners:
SPRI_4458
Cyclopropane-fatty-acyl-phospholipid synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.966
SPRI_3488
Thioesterase domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.780
SPRI_3489
Polyketide synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.780
SPRI_3487
Beta-ketoacyl synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.637
SPRI_0164
Cyclopropane-fatty-acyl-phospholipid synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.557
SPRI_3486
Beta-ketoacyl synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.557
SPRI_7189
Cyclopropane-fatty-acyl-phospholipid synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.557
SPRI_6421
Deoxyribodipyrimidine photolyase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.
 
   
 0.519
SPRI_6026
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
    0.486
SPRI_3485
Putative polyunsaturated fatty acid synthase PfaD; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.435
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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