Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SPRI_3584ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (552 aa)    
Predicted Functional Partners:
SPRI_3583
ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.985
SPRI_3582
MarR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.771
SPRI_3371
Antibiotic ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.682
SPRI_3372
Multidrug ABC transporter ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.676
SPRI_3673
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.641
c101_12c
Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.624
SPRI_4196
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.624
SPRI_7116
Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.624
SPRI_3438
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.621
SPRI_4040
Antibiotic resistance ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.621
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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