Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
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[Homology]
Score
SPRI_3794Thioredoxin reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (324 aa)    
Predicted Functional Partners:
SPRI_3793
Thioredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
 
 0.991
SPRI_2453
Thioredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
 
 0.934
SPRI_3832
Cystathionine gamma-lyase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.908
SPRI_5613
Cysteine desulfurase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.908
SPRI_6266
Cystathionine gamma-synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.908
SPRI_2837
Alkyl hydroperoxide reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.868
SPRI_0724
Thioredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.829
SPRI_2475
Thioredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.770
SPRI_6404
Thioredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.769
SPRI_3795
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.754
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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