STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_3865Copper chaperone; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
SPRI_3866
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.973
SPRI_3864
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.969
SPRI_3863
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
  
 0.958
SPRI_5351
Ubiquinol-cytochrome c reductase cytochrome b subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.916
SPRI_5345
Cytochrome C oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
 
 0.901
SPRI_5348
Cytochrome B561; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.900
SPRI_1903
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.883
SPRI_5349
Cystathionine beta-lyase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.883
SPRI_0659
Cytochrome c oxidase subunit II; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.870
SPRI_5343
Cytochrome c oxidase subunit II; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
   0.870
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.