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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4039Multidrug ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
SPRI_4040
Antibiotic resistance ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.964
SPRI_1991
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.848
c101_12c
Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.825
SPRI_3153
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.825
SPRI_5253
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.825
SPRI_7116
Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.825
SPRI_2925
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.824
SPRI_3438
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.824
SPRI_4196
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.824
SPRI_5822
Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.823
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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