STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4104Trehalose phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (284 aa)    
Predicted Functional Partners:
SPRI_4105
Alpha,alpha-trehalose-phosphate synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.999
SPRI_2443
Trehalose synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.983
SPRI_1692
Alpha amylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 0.962
SPRI_0696
Glycoside hydrolase family 15; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.946
SPRI_6170
PTS glucose transporter subunit IIA; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
  0.900
SPRI_4103
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.877
SPRI_4102
ABC transporter solute-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.804
SPRI_4099
Sugar kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
  
    0.803
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.771
SPRI_2441
Alpha-glucan phosphorylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 
 0.764
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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