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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4245Amidohydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (398 aa)    
Predicted Functional Partners:
SPRI_4247
acyl-CoA dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.901
SPRI_4246
acyl-CoA dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.851
SPRI_4244
cyclohex-1-ene-1-carboxylate:CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
    0.821
SPRI_6198
Isochorismatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.608
SPRI_4291
Aminoacylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.605
SPRI_2274
Luciferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.567
SPRI_5772
ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
     0.540
SPRI_2681
UBA/THIF-type NAD/FAD-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.532
SPRI_4261
DoxX family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.527
SPRI_4698
Galactose oxidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.520
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.