Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
SPRI_4296Glyoxalase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (124 aa)    
Predicted Functional Partners:
SPRI_3593
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.643
mca
GlcNAc-PI de-N-acetylase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
     0.586
SPRI_4880
DSBA oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.566
SPRI_5485
Toxic cation resistance protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.530
SPRI_1714
Mini-circle protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.510
SPRI_1671
DsbA oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.500
SPRI_4504
Glyoxalase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.499
SPRI_4297
Phosphoesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.494
SPRI_0067
Mini-circle protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.466
SPRI_7286
Mini-circle protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.466
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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