Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_4297Phosphoesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (505 aa)    
Predicted Functional Partners:
SPRI_4299
F420-dependent oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.679
SPRI_4156
Zn-dependent protease with chaperone function; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.612
SPRI_4298
Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.586
SPRI_4700
Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.573
SPRI_4317
FO synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.530
SPRI_1376
Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.522
SPRI_6901
Endonuclease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.511
SPRI_4296
Glyoxalase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.494
SPRI_2458
Extracellular solute-binding lipoprotein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.483
SPRI_5177
Putative ferredoxin; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.439
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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